CRAN Package Check Results for Package deconstructSigs

Last updated on 2024-04-18 22:52:37 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8.0 3.52 53.38 56.90 NOTE
r-devel-linux-x86_64-debian-gcc 1.8.0 2.63 38.73 41.36 NOTE
r-devel-linux-x86_64-fedora-clang 1.8.0 68.77 NOTE
r-devel-linux-x86_64-fedora-gcc 1.8.0 69.55 NOTE
r-prerel-macos-arm64 1.8.0 5.00 ERROR
r-prerel-macos-x86_64 1.8.0 7.00 ERROR
r-prerel-windows-x86_64 1.8.0 5.00 61.00 66.00 NOTE
r-patched-linux-x86_64 1.8.0 2.26 49.23 51.49 NOTE
r-release-linux-x86_64 1.8.0 1.94 52.34 54.28 OK
r-release-macos-arm64 1.8.0 6.00 ERROR
r-release-macos-x86_64 1.8.0 6.00 ERROR
r-release-windows-x86_64 1.8.0 5.00 69.00 74.00 OK
r-oldrel-macos-arm64 1.8.0 10.00 ERROR
r-oldrel-windows-x86_64 1.8.0 5.00 70.00 75.00 OK

Check Details

Version: 1.8.0
Check: Rd \usage sections
Result: NOTE Documented arguments not in \usage in Rd file 'getTriContextFraction.Rd': ‘trimer.counts.ref’ Documented arguments not in \usage in Rd file 'norm.it.Rd': ‘trimer.counts’ Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-prerel-windows-x86_64, r-patched-linux-x86_64

Version: 1.8.0
Check: package dependencies
Result: ERROR Package required but not available: ‘BSgenome.Hsapiens.UCSC.hg19’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-prerel-macos-arm64, r-prerel-macos-x86_64, r-release-macos-x86_64, r-oldrel-macos-arm64

Version: 1.8.0
Check: package dependencies
Result: ERROR Package required but not available: ‘BSgenome.Hsapiens.UCSC.hg19’ Package suggested but not available for checking: ‘VariantAnnotation’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-arm64