CRAN Package Check Results for Package flexsurv

Last updated on 2024-02-24 21:40:20 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.2.2 88.02 2178.88 2266.90 ERROR
r-devel-linux-x86_64-debian-gcc 2.2.2 66.59 320.75 387.34 NOTE
r-devel-linux-x86_64-fedora-clang 2.2.2 643.28 OK
r-devel-linux-x86_64-fedora-gcc 2.2.2 698.04 OK
r-devel-windows-x86_64 2.2.2 65.00 415.00 480.00 OK
r-patched-linux-x86_64 2.2.2 85.46 412.48 497.94 OK
r-release-linux-x86_64 2.2.2 85.21 413.32 498.53 OK
r-release-macos-arm64 2.2.2 201.00 OK
r-release-macos-x86_64 2.2.2 309.00 NOTE
r-release-windows-x86_64 2.2.2 86.00 483.00 569.00 OK
r-oldrel-macos-arm64 2.2.2 153.00 OK
r-oldrel-windows-x86_64 2.2.2 84.00 446.00 530.00 OK

Check Details

Version: 2.2.2
Check: Rd files
Result: NOTE checkRd: (-1) bootci.fmsm.Rd:24: Lost braces 24 | \item{fn}{Function to bootstrap the results of. It must have an argument named `code{x} giving a fitted flexsurv model object. This may return a value with any format, e.g. list, matrix or vector, as long as it can be converted to a numeric vector with \code{unlist}. See the example below.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.2.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘standsurv.Rmd’ using rmarkdown --- finished re-building ‘standsurv.Rmd’ --- re-building ‘flexsurv.Rnw’ using knitr --- finished re-building ‘flexsurv.Rnw’ --- re-building ‘multistate.Rnw’ using knitr --- finished re-building ‘multistate.Rnw’ +-+multistate.pdf Assertion failure at kmp_runtime.cpp(6891): temp_reg_status_file_name. OMP: Error #13: Assertion failure at kmp_runtime.cpp(6891). OMP: Hint Please submit a bug report with this message, compile and run commands used, and machine configuration info including native compiler and operating system versions. Faster response will be obtained by including all program sources. For information on submitting this issue, please see https://github.com/llvm/llvm-project/issues/. Assertion failure at kmp_runtime.cpp(6891): temp_reg_status_file_name. OMP: Error #13: Assertion failure at kmp_runtime.cpp(6891). OMP: Hint Please submit a bug report with this message, compile and run commands used, and machine configuration info including native compiler and operating system versions. Faster response will be obtained by including all program sources. For information on submitting this issue, please see https://github.com/llvm/llvm-project/issues/. Killed --- re-building ‘distributions.Rnw’ using Sweave --- finished re-building ‘distributions.Rnw’ --- re-building ‘flexsurv-examples.Rnw’ using Sweave Loading required package: survival Forming integrated rmst function... Forming integrated mean function... Loading required package: TH.data Loading required package: MASS Attaching package: ‘TH.data’ The following object is masked from ‘package:MASS’: geyser --- finished re-building ‘flexsurv-examples.Rnw’ SUMMARY: processing the following file failed: ‘multistate.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.2.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'flexsurvcure', 'survminer' Flavor: r-release-macos-x86_64

Version: 2.2.2
Check: re-building of vignette outputs
Result: NOTE Error(s) in re-building vignettes: --- re-building ‘standsurv.Rmd’ using rmarkdown Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. Quitting from lines 85-90 (standsurv.Rmd) Error: processing vignette 'standsurv.Rmd' failed with diagnostics: there is no package called 'flexsurvcure' --- failed re-building ‘standsurv.Rmd’ --- re-building ‘flexsurv.Rnw’ using knitr --- finished re-building ‘flexsurv.Rnw’ --- re-building ‘multistate.Rnw’ using knitr --- finished re-building ‘multistate.Rnw’ --- re-building ‘distributions.Rnw’ using Sweave --- finished re-building ‘distributions.Rnw’ --- re-building ‘flexsurv-examples.Rnw’ using Sweave Loading required package: survival Forming integrated rmst function... Forming integrated mean function... Loading required package: TH.data Loading required package: MASS Attaching package: ‘TH.data’ The following object is masked from ‘package:MASS’: geyser --- finished re-building ‘flexsurv-examples.Rnw’ SUMMARY: processing the following file failed: ‘standsurv.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64