UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets

Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.

Version: 1.4.0
Depends: R (≥ 3.0)
Imports: ggplot2, gridExtra, plyr, utils, stats, methods, grDevices, scales
Suggests: knitr
Published: 2019-05-22
Author: Jake Conway [cre], Nils Gehlenborg [aut]
Maintainer: Jake Conway <jake_conway at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
CRAN checks: UpSetR results


Reference manual: UpSetR.pdf
Vignettes: Attribute Plots
Basic Usage
Querying the Data
Incorporating Set Metadata


Package source: UpSetR_1.4.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): UpSetR_1.4.0.tgz, r-release (x86_64): UpSetR_1.4.0.tgz, r-oldrel: UpSetR_1.4.0.tgz
Old sources: UpSetR archive

Reverse dependencies:

Reverse depends: SummarizedBenchmark
Reverse imports: artMS, ASpli, cRegulome, DiscoRhythm, iCOBRA, ideal, immunarch, Inflect, ivygapSE, LymphoSeq, MAGAR, MatrixQCvis, miceFast, naniar, plinkQC, PTXQC, pulsedSilac, QCAcluster, seqsetvis, spatialHeatmap, SubgrPlots, VennDetail, ViSEAGO
Reverse suggests: Cepo, ChIPpeakAnno, distinct, HMP2Data, MetaNeighbor, MultiAssayExperiment, MungeSumstats, muscat, OmicNavigator, SingleCellMultiModal, systemPipeShiny, TFutils, TimeSeriesExperiment


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